INFO: No output directory specified (--dir) INFO: Using directory: "Test_SAXS_20251123_030035" INFO: Regenerating c-file: Test_SAXS.c DEBUG: CMD: /Users/runner/miniconda3/envs/mcxtrace/bin/mcxtrace -t -o ./Test_SAXS.c Test_SAXS.instr Info: 'SAXSSpheres' is a contributed component. Info: 'SAXSShells' is a contributed component. Info: 'SAXSCylinders' is a contributed component. Info: 'SAXSEllipticCylinders' is a contributed component. Info: 'SAXSLiposomes' is a contributed component. Info: 'SAXSNanodiscs' is a contributed component. Info: 'SAXSNanodiscsWithTags' is a contributed component. Info: 'SAXSPDB' is a contributed component. Info: 'SAXSPDBFast' is a contributed component. Info: 'SAXSNanodiscsFast' is a contributed component. Info: 'SAXSNanodiscsWithTagsFast' is a contributed component. Info: 'SAXSQMonitor' is a contributed component. CFLAGS= @GSLFLAGS@ -DFUNNEL ----------------------------------------------------------- Generating single GPU kernel or single CPU section layout: ----------------------------------------------------------- Generating GPU/CPU -DFUNNEL layout: Component Sample2 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> CPU section from component Sample2 Component Sample3 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> GPU kernel from component Sample4 Component Sample5 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> CPU section from component Sample5 Component Sample6 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. Component Sample7 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. Component Sample9 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. Component Sample10 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. Component Sample11 is NOACC, CPUONLY=1 -> FUNNEL mode enabled, SPLIT within buffer. -> GPU kernel from component Beamstop ----------------------------------------------------------- DEBUG: CMD: /Users/runner/miniconda3/envs/mcxtrace/bin/mcxtrace finished INFO: Recompiling: ./Test_SAXS.out DEBUG: CMD: mpicc -o ./Test_SAXS.out ./Test_SAXS.c -lm -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/runner/miniconda3/envs/mcxtrace/lib -L/Users/runner/miniconda3/envs/mcxtrace/lib -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -isystem /Users/runner/miniconda3/envs/mcxtrace/include -DUSE_MPI -lmpi -headerpad_max_install_names -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -isystem /Users/runner/miniconda3/envs/mcxtrace/include -O2 -g -DNDEBUG -isysroot /Applications/Xcode_16.4.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX15.5.sdk -D_DARWIN_C_SOURCE -I/Users/runner/miniconda3/envs/mcxtrace/include -Wl,-rpath,/Users/runner/miniconda3/envs/mcxtrace/lib -L/Users/runner/miniconda3/envs/mcxtrace/lib -fno-PIC -fPIE -flto -O3 -march=native -fno-math-errno -ftree-vectorize -g -DNDEBUG -D_POSIX_SOURCE -std=c99 -lm -I/Users/runner/miniconda3/envs/mcxtrace/include -Wl,-rpath,/Users/runner/miniconda3/envs/mcxtrace/lib -L/Users/runner/miniconda3/envs/mcxtrace/lib -lgsl -lgslcblas -DFUNNEL ./Test_SAXS.c:16282:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16282 | if ((( _instrument_var._parameters.SAMPLE == 0 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16282:49: note: remove extraneous parentheses around the comparison to silence this warning 16282 | if ((( _instrument_var._parameters.SAMPLE == 0 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16282:49: note: use '=' to turn this equality comparison into an assignment 16282 | if ((( _instrument_var._parameters.SAMPLE == 0 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16304:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16304 | if ((( _instrument_var._parameters.SAMPLE == 1 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16304:49: note: remove extraneous parentheses around the comparison to silence this warning 16304 | if ((( _instrument_var._parameters.SAMPLE == 1 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16304:49: note: use '=' to turn this equality comparison into an assignment 16304 | if ((( _instrument_var._parameters.SAMPLE == 1 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16326:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16326 | if ((( _instrument_var._parameters.SAMPLE == 2 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16326:49: note: remove extraneous parentheses around the comparison to silence this warning 16326 | if ((( _instrument_var._parameters.SAMPLE == 2 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16326:49: note: use '=' to turn this equality comparison into an assignment 16326 | if ((( _instrument_var._parameters.SAMPLE == 2 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16348:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16348 | if ((( _instrument_var._parameters.SAMPLE == 3 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16348:49: note: remove extraneous parentheses around the comparison to silence this warning 16348 | if ((( _instrument_var._parameters.SAMPLE == 3 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16348:49: note: use '=' to turn this equality comparison into an assignment 16348 | if ((( _instrument_var._parameters.SAMPLE == 3 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16370:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16370 | if ((( _instrument_var._parameters.SAMPLE == 4 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16370:49: note: remove extraneous parentheses around the comparison to silence this warning 16370 | if ((( _instrument_var._parameters.SAMPLE == 4 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16370:49: note: use '=' to turn this equality comparison into an assignment 16370 | if ((( _instrument_var._parameters.SAMPLE == 4 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16392:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16392 | if ((( _instrument_var._parameters.SAMPLE == 5 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16392:49: note: remove extraneous parentheses around the comparison to silence this warning 16392 | if ((( _instrument_var._parameters.SAMPLE == 5 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16392:49: note: use '=' to turn this equality comparison into an assignment 16392 | if ((( _instrument_var._parameters.SAMPLE == 5 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16414:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16414 | if ((( _instrument_var._parameters.SAMPLE == 6 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16414:49: note: remove extraneous parentheses around the comparison to silence this warning 16414 | if ((( _instrument_var._parameters.SAMPLE == 6 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16414:49: note: use '=' to turn this equality comparison into an assignment 16414 | if ((( _instrument_var._parameters.SAMPLE == 6 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16436:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16436 | if ((( _instrument_var._parameters.SAMPLE == 7 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16436:49: note: remove extraneous parentheses around the comparison to silence this warning 16436 | if ((( _instrument_var._parameters.SAMPLE == 7 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16436:49: note: use '=' to turn this equality comparison into an assignment 16436 | if ((( _instrument_var._parameters.SAMPLE == 7 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16458:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16458 | if ((( _instrument_var._parameters.SAMPLE == 9 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ ./Test_SAXS.c:16458:49: note: remove extraneous parentheses around the comparison to silence this warning 16458 | if ((( _instrument_var._parameters.SAMPLE == 9 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16458:49: note: use '=' to turn this equality comparison into an assignment 16458 | if ((( _instrument_var._parameters.SAMPLE == 9 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16480:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16480 | if ((( _instrument_var._parameters.SAMPLE == 10 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./Test_SAXS.c:16480:49: note: remove extraneous parentheses around the comparison to silence this warning 16480 | if ((( _instrument_var._parameters.SAMPLE == 10 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16480:49: note: use '=' to turn this equality comparison into an assignment 16480 | if ((( _instrument_var._parameters.SAMPLE == 10 ))) // conditional WHEN execution | ^~ | = ./Test_SAXS.c:16502:49: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] 16502 | if ((( _instrument_var._parameters.SAMPLE == 11 ))) // conditional WHEN execution | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./Test_SAXS.c:16502:49: note: remove extraneous parentheses around the comparison to silence this warning 16502 | if ((( _instrument_var._parameters.SAMPLE == 11 ))) // conditional WHEN execution | ~ ^ ~ ./Test_SAXS.c:16502:49: note: use '=' to turn this equality comparison into an assignment 16502 | if ((( _instrument_var._parameters.SAMPLE == 11 ))) // conditional WHEN execution | ^~ | = 11 warnings generated. ld: warning: duplicate -rpath '/Users/runner/miniconda3/envs/mcxtrace/lib' ignored ld: warning: duplicate -rpath '/Users/runner/miniconda3/envs/mcxtrace/lib' ignored ld: warning: duplicate -rpath '/Users/runner/miniconda3/envs/mcxtrace/lib' ignored DEBUG: CMD: mpicc finished DEBUG: CMD: otool -l ./Test_SAXS.out DEBUG: CMD: otool finished INFO: ===